Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 TSPY15P-201ENST00000457163 923 ntBASIC17.06■□□□□ 0.32
TRIM2Q9C040 CA15P1-201ENST00000481698 905 ntBASIC17.06■□□□□ 0.32
TRIM2Q9C040 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 LINC01023-201ENST00000606054 436 ntBASIC17.06■□□□□ 0.32
TRIM2Q9C040 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 AL499627.1-201ENST00000569373 2188 ntBASIC17.06■□□□□ 0.32
TRIM2Q9C040 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 AL390961.4-201ENST00000623958 2535 ntBASIC17.06■□□□□ 0.32
TRIM2Q9C040 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 AL162741.1-201ENST00000565563 1558 ntBASIC17.06■□□□□ 0.32
TRIM2Q9C040 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM2Q9C040 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM2Q9C040 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 AP003071.4-201ENST00000562276 1284 ntBASIC17.05■□□□□ 0.32
TRIM2Q9C040 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 AC008622.2-201ENST00000617006 1229 ntBASIC17.05■□□□□ 0.32
TRIM2Q9C040 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM2Q9C040 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.05■□□□□ 0.32
TRIM2Q9C040 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 KRT18P41-201ENST00000518924 1277 ntBASIC17.04■□□□□ 0.32
TRIM2Q9C040 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 REXO1L10P-201ENST00000615707 1290 ntBASIC17.04■□□□□ 0.32
TRIM2Q9C040 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM2Q9C040 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM2Q9C040 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.03■□□□□ 0.32
TRIM2Q9C040 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms