Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 DUX4L26-201ENST00000489078 1255 ntBASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 AL049597.2-201ENST00000565575 961 ntBASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.21■□□□□ 0.51
CCM2Q9BSQ5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 HOMER2P1-201ENST00000455653 964 ntBASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 MIR3180-4-201ENST00000582223 153 ntBASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCM2Q9BSQ5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 AC063952.2-201ENST00000498792 1227 ntBASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 AC010240.3-201ENST00000607688 395 ntBASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 WIZP1-201ENST00000531444 2299 ntBASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCM2Q9BSQ5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 AL163051.1-201ENST00000569214 1512 ntBASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2Q9BSQ5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms