Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 NEK4P2-201ENST00000580004 1012 ntBASIC16.98■□□□□ 0.31
TIMP4Q99727 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.98■□□□□ 0.31
TIMP4Q99727 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TIMP4Q99727 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TIMP4Q99727 CR769767.2-201ENST00000622735 460 ntBASIC16.98■□□□□ 0.31
TIMP4Q99727 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 AIRN-201ENST00000601203 4374 ntBASIC16.98■□□□□ 0.31
TIMP4Q99727 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.98■□□□□ 0.31
TIMP4Q99727 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP4Q99727 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 GPAT2P1-201ENST00000444924 1672 ntBASIC16.97■□□□□ 0.31
TIMP4Q99727 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TIMP4Q99727 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.97■□□□□ 0.31
TIMP4Q99727 HOMER2P1-201ENST00000455653 964 ntBASIC16.97■□□□□ 0.31
TIMP4Q99727 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
TIMP4Q99727 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP4Q99727 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.97■□□□□ 0.31
TIMP4Q99727 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TIMP4Q99727 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 ANO7L1-203ENST00000602586 1720 ntBASIC16.96■□□□□ 0.31
TIMP4Q99727 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.96■□□□□ 0.31
TIMP4Q99727 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TIMP4Q99727 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TIMP4Q99727 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMP4Q99727 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMP4Q99727 AL023284.2-201ENST00000405850 579 ntBASIC16.96■□□□□ 0.31
TIMP4Q99727 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TIMP4Q99727 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.96■□□□□ 0.31
TIMP4Q99727 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP4Q99727 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMP4Q99727 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP4Q99727 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP4Q99727 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.96■□□□□ 0.31
TIMP4Q99727 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP4Q99727 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.96■□□□□ 0.3
TIMP4Q99727 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMP4Q99727 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
TIMP4Q99727 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMP4Q99727 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP4Q99727 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMP4Q99727 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TIMP4Q99727 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TIMP4Q99727 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP4Q99727 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP4Q99727 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
TIMP4Q99727 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.95■□□□□ 0.3
TIMP4Q99727 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
TIMP4Q99727 MYC-208ENST00000641036 567 ntBASIC16.95■□□□□ 0.3
TIMP4Q99727 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP4Q99727 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TIMP4Q99727 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms