Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 AC073592.3-201ENST00000625118 1834 ntBASIC17.56■□□□□ 0.4
BBS4Q96RK4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 SLC25A1P2-201ENST00000430693 912 ntBASIC17.56■□□□□ 0.4
BBS4Q96RK4 CCR12P-201ENST00000446203 998 ntBASIC17.56■□□□□ 0.4
BBS4Q96RK4 TSPY17P-201ENST00000450329 467 ntBASIC17.56■□□□□ 0.4
BBS4Q96RK4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BBS4Q96RK4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BBS4Q96RK4 KRT8P45-201ENST00000414328 1447 ntBASIC17.55■□□□□ 0.4
BBS4Q96RK4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 MIR564-202ENST00000385049 94 ntBASIC17.55■□□□□ 0.4
BBS4Q96RK4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 C2orf69P3-201ENST00000565542 1120 ntBASIC17.55■□□□□ 0.4
BBS4Q96RK4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.55■□□□□ 0.4
BBS4Q96RK4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BBS4Q96RK4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BBS4Q96RK4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.54■□□□□ 0.4
BBS4Q96RK4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms