Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 RPS2P28-201ENST00000314255 741 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AC040169.1-201ENST00000565382 521 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AC114341.1-201ENST00000618070 349 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AL158211.5-201ENST00000623583 2518 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 HLA-J-201ENST00000462773 1622 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AC023274.1-201ENST00000418278 595 ntBASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD1Q96PZ7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 NUS1P2-201ENST00000417358 873 ntBASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 AL645939.2-201ENST00000427340 991 ntBASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 PAWRP1-201ENST00000451083 565 ntBASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 MTDHP5-201ENST00000598980 586 ntBASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD1Q96PZ7 RPS2P1-201ENST00000434010 821 ntBASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CSMD1Q96PZ7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 AC002347.1-201ENST00000569543 541 ntBASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CSMD1Q96PZ7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms