Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSPG4P5Q96PW8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 AL390961.4-201ENST00000623958 2535 ntBASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 AC104390.1-201ENST00000555663 520 ntBASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
CSPG4P5Q96PW8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 ECEL1P3-201ENST00000427961 737 ntBASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 AC012306.2-201ENST00000609350 630 ntBASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 AC133561.5-201ENST00000635547 218 ntBASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 ESPNP-201ENST00000270691 2015 ntBASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 AC135776.1-201ENST00000319817 2481 ntBASIC19.06■□□□□ 0.64
CSPG4P5Q96PW8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 SDHAP2-201ENST00000455183 2001 ntBASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSPG4P5Q96PW8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms