Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 AC113404.2-201ENST00000507884 177 ntBASIC19.72■□□□□ 0.75
CASD1Q96PB1 AC079776.4-201ENST00000511039 504 ntBASIC19.72■□□□□ 0.75
CASD1Q96PB1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 BNIP3P18-201ENST00000593976 575 ntBASIC19.72■□□□□ 0.75
CASD1Q96PB1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASD1Q96PB1 HLA-A-201ENST00000376802 1334 ntBASIC19.72■□□□□ 0.75
CASD1Q96PB1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.72■□□□□ 0.75
CASD1Q96PB1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CASD1Q96PB1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CASD1Q96PB1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASD1Q96PB1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASD1Q96PB1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 TSPY12P-201ENST00000421279 868 ntBASIC19.71■□□□□ 0.75
CASD1Q96PB1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CASD1Q96PB1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 AC009102.3-201ENST00000623118 1491 ntBASIC19.71■□□□□ 0.75
CASD1Q96PB1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.71■□□□□ 0.75
CASD1Q96PB1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CASD1Q96PB1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASD1Q96PB1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.69■□□□□ 0.74
CASD1Q96PB1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 MIR5100-201ENST00000579544 119 ntBASIC19.69■□□□□ 0.74
CASD1Q96PB1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 TP73-AS1-207ENST00000624167 988 ntBASIC19.69■□□□□ 0.74
CASD1Q96PB1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
CASD1Q96PB1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASD1Q96PB1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 AC099343.3-201ENST00000605834 2503 ntBASIC19.68■□□□□ 0.74
CASD1Q96PB1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CASD1Q96PB1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASD1Q96PB1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms