Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 AL645608.8-201ENST00000606034 2086 ntBASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CHAMP1Q96JM3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 AC009053.2-201ENST00000563701 2365 ntBASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHAMP1Q96JM3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 KRT17P3-201ENST00000420566 1262 ntBASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHAMP1Q96JM3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.45■■□□□ 1.03
CHAMP1Q96JM3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.45■■□□□ 1.03
CHAMP1Q96JM3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHAMP1Q96JM3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHAMP1Q96JM3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 MIR1224-201ENST00000408193 85 ntBASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 ITM2C-210ENST00000620962 501 ntBASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHAMP1Q96JM3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.44■■□□□ 1.02
CHAMP1Q96JM3 NIFKP9-201ENST00000419265 221 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms