Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.66■□□□□ 0.42
ITCHQ96J02 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 AC008764.6-201ENST00000595909 2069 ntBASIC17.66■□□□□ 0.42
ITCHQ96J02 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.66■□□□□ 0.42
ITCHQ96J02 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 AC012313.1-201ENST00000593393 3059 ntBASIC17.66■□□□□ 0.42
ITCHQ96J02 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
ITCHQ96J02 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ITCHQ96J02 HTR7P1-201ENST00000538670 1336 ntBASIC17.66■□□□□ 0.42
ITCHQ96J02 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ITCHQ96J02 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITCHQ96J02 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.65■□□□□ 0.42
ITCHQ96J02 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 AL353807.1-201ENST00000427475 662 ntBASIC17.65■□□□□ 0.42
ITCHQ96J02 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.65■□□□□ 0.42
ITCHQ96J02 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ITCHQ96J02 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.65■□□□□ 0.42
ITCHQ96J02 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.65■□□□□ 0.42
ITCHQ96J02 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
ITCHQ96J02 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ITCHQ96J02 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ITCHQ96J02 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.65■□□□□ 0.42
ITCHQ96J02 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITCHQ96J02 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ITCHQ96J02 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ITCHQ96J02 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ITCHQ96J02 KRT16P1-201ENST00000399124 1418 ntBASIC17.64■□□□□ 0.42
ITCHQ96J02 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
ITCHQ96J02 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.64■□□□□ 0.42
ITCHQ96J02 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ITCHQ96J02 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ITCHQ96J02 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ITCHQ96J02 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 CKBP1-201ENST00000565489 1086 ntBASIC17.64■□□□□ 0.41
ITCHQ96J02 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 AC026271.3-201ENST00000571884 352 ntBASIC17.64■□□□□ 0.41
ITCHQ96J02 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 AC011298.2-201ENST00000617989 482 ntBASIC17.64■□□□□ 0.41
ITCHQ96J02 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.64■□□□□ 0.41
ITCHQ96J02 AL031985.4-201ENST00000642138 673 ntBASIC17.64■□□□□ 0.41
ITCHQ96J02 MYLKP1-201ENST00000509077 1580 ntBASIC17.64■□□□□ 0.41
ITCHQ96J02 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.64■□□□□ 0.41
ITCHQ96J02 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ITCHQ96J02 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.64■□□□□ 0.41
ITCHQ96J02 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ITCHQ96J02 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITCHQ96J02 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ITCHQ96J02 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms