Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20■□□□□ 0.79
LRCH3Q96II8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20■□□□□ 0.79
LRCH3Q96II8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRCH3Q96II8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
LRCH3Q96II8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH3Q96II8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH3Q96II8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20■□□□□ 0.79
LRCH3Q96II8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH3Q96II8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20■□□□□ 0.79
LRCH3Q96II8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH3Q96II8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH3Q96II8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 AC092474.2-201ENST00000424288 719 ntBASIC19.99■□□□□ 0.79
LRCH3Q96II8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.99■□□□□ 0.79
LRCH3Q96II8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH3Q96II8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 RCN1P2-201ENST00000398357 915 ntBASIC19.98■□□□□ 0.79
LRCH3Q96II8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 AL035252.4-201ENST00000624174 288 ntBASIC19.98■□□□□ 0.79
LRCH3Q96II8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRCH3Q96II8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRCH3Q96II8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH3Q96II8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH3Q96II8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH3Q96II8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH3Q96II8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH3Q96II8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRCH3Q96II8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 UNC93B6-202ENST00000528242 690 ntBASIC19.97■□□□□ 0.79
LRCH3Q96II8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 AC005829.1-201ENST00000570002 483 ntBASIC19.97■□□□□ 0.79
LRCH3Q96II8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 MIR4469-201ENST00000583919 79 ntBASIC19.97■□□□□ 0.79
LRCH3Q96II8 AC138761.1-201ENST00000584393 385 ntBASIC19.97■□□□□ 0.79
LRCH3Q96II8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 AL096865.1-201ENST00000606796 927 ntBASIC19.97■□□□□ 0.79
LRCH3Q96II8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.97■□□□□ 0.79
LRCH3Q96II8 AL353692.3-201ENST00000407031 1396 ntBASIC19.96■□□□□ 0.79
LRCH3Q96II8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRCH3Q96II8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.96■□□□□ 0.79
LRCH3Q96II8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms