Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM5Q96HC4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM5Q96HC4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PDLIM5Q96HC4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PDLIM5Q96HC4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM5Q96HC4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM5Q96HC4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.08■□□□□ 0.49
PDLIM5Q96HC4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 AC009065.1-201ENST00000564055 1225 ntBASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 AL512604.3-201ENST00000569583 964 ntBASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 AC112497.1-201ENST00000624824 639 ntBASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM5Q96HC4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 AL596275.1-201ENST00000423464 877 ntBASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 AIRN-201ENST00000601203 4374 ntBASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM5Q96HC4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 AC007613.1-201ENST00000572811 2597 ntBASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM5Q96HC4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms