Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 AP006294.2-201ENST00000641667 209 ntBASIC19.59■□□□□ 0.73
TRIM11Q96F44 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM11Q96F44 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM11Q96F44 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM11Q96F44 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRIM11Q96F44 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.58■□□□□ 0.73
TRIM11Q96F44 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM11Q96F44 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM11Q96F44 CCR12P-201ENST00000446203 998 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRIM11Q96F44 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.58■□□□□ 0.72
TRIM11Q96F44 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM11Q96F44 AL353719.1-201ENST00000566847 864 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 MIR4674-201ENST00000582457 87 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM11Q96F44 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM11Q96F44 AL023803.3-201ENST00000615559 522 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM11Q96F44 TMEM191A-211ENST00000637163 1067 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM11Q96F44 AC007613.1-201ENST00000572811 2597 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRIM11Q96F44 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM11Q96F44 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM11Q96F44 KRT8P7-201ENST00000533003 1432 ntBASIC19.58■□□□□ 0.72
TRIM11Q96F44 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM11Q96F44 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 AC036111.1-201ENST00000533973 1582 ntBASIC19.57■□□□□ 0.72
TRIM11Q96F44 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM11Q96F44 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM11Q96F44 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 FITM1-202ENST00000559294 800 ntBASIC19.56■□□□□ 0.72
TRIM11Q96F44 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 HOXB1-202ENST00000577092 1414 ntBASIC19.56■□□□□ 0.72
TRIM11Q96F44 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 AC093677.2-201ENST00000600169 1863 ntBASIC19.56■□□□□ 0.72
TRIM11Q96F44 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM11Q96F44 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 AC135776.1-201ENST00000319817 2481 ntBASIC19.56■□□□□ 0.72
TRIM11Q96F44 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM11Q96F44 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms