Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 AC135050.7-201ENST00000624508 2218 ntBASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 AC006011.2-201ENST00000621313 1158 ntBASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTHRC1Q96CG8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.14■□□□□ 0.34
CTHRC1Q96CG8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 RN7SL850P-201ENST00000579959 291 ntBASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 NEFHP1-201ENST00000412845 2629 ntBASIC17.14■□□□□ 0.33
CTHRC1Q96CG8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 AL157888.1-201ENST00000631930 593 ntBASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 AC093677.2-201ENST00000600169 1863 ntBASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 AC099343.3-201ENST00000605834 2503 ntBASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTHRC1Q96CG8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 GMCL1P1-201ENST00000463439 1581 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 RNF152P1-201ENST00000397754 604 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 STARP1-201ENST00000397973 869 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms