Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 LINC01311-201ENST00000565162 1445 ntBASIC23.77■■□□□ 1.4
ZNF428Q96B54 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 VENTXP5-201ENST00000523979 775 ntBASIC23.77■■□□□ 1.4
ZNF428Q96B54 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.77■■□□□ 1.4
ZNF428Q96B54 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF428Q96B54 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 AC005082.1-201ENST00000413042 2259 ntBASIC23.77■■□□□ 1.4
ZNF428Q96B54 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF428Q96B54 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 MIR149-201ENST00000384879 89 ntBASIC23.76■■□□□ 1.39
ZNF428Q96B54 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 KRT18P56-201ENST00000507275 550 ntBASIC23.76■■□□□ 1.39
ZNF428Q96B54 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 AC010240.3-201ENST00000607688 395 ntBASIC23.76■■□□□ 1.39
ZNF428Q96B54 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 AL121956.5-201ENST00000625261 221 ntBASIC23.76■■□□□ 1.39
ZNF428Q96B54 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.76■■□□□ 1.39
ZNF428Q96B54 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF428Q96B54 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF428Q96B54 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
ZNF428Q96B54 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 AL162741.1-201ENST00000565563 1558 ntBASIC23.74■■□□□ 1.39
ZNF428Q96B54 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 AC012313.10-201ENST00000623509 926 ntBASIC23.74■■□□□ 1.39
ZNF428Q96B54 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms