Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF40Q8TER5 AC092364.2-202ENST00000597012 1073 ntBASIC27.34■■□□□ 1.97
ARHGEF40Q8TER5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
ARHGEF40Q8TER5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF40Q8TER5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF40Q8TER5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF40Q8TER5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 CNN2P11-201ENST00000429351 262 ntBASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 TCF3P1-201ENST00000423021 1937 ntBASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
ARHGEF40Q8TER5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
ARHGEF40Q8TER5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
ARHGEF40Q8TER5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 COX20P2-201ENST00000452636 358 ntBASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 AC106028.4-201ENST00000614509 607 ntBASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ARHGEF40Q8TER5 MIR770-201ENST00000390219 98 ntBASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 AC005829.1-201ENST00000570002 483 ntBASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 SNHG9-202ENST00000564014 471 ntBASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 NKAPP1-205ENST00000585790 367 ntBASIC27.31■■□□□ 1.96
ARHGEF40Q8TER5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 AC073621.1-201ENST00000392730 636 ntBASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 AC068472.1-201ENST00000474589 881 ntBASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 AP002472.1-201ENST00000577490 586 ntBASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 MIR1199-201ENST00000621445 119 ntBASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC27.3■■□□□ 1.96
ARHGEF40Q8TER5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
ARHGEF40Q8TER5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ARHGEF40Q8TER5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC27.28■■□□□ 1.96
ARHGEF40Q8TER5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms