Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.32■■□□□ 1
CCDC148Q8NFR7 RCN1P1-201ENST00000400413 996 ntBASIC21.32■■□□□ 1
CCDC148Q8NFR7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.32■■□□□ 1
CCDC148Q8NFR7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.32■■□□□ 1
CCDC148Q8NFR7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.32■■□□□ 1
CCDC148Q8NFR7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.32■■□□□ 1
CCDC148Q8NFR7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC148Q8NFR7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 SEC1P-202ENST00000473944 940 ntBASIC21.31■■□□□ 1
CCDC148Q8NFR7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 AC009065.1-201ENST00000564055 1225 ntBASIC21.31■■□□□ 1
CCDC148Q8NFR7 MIR3180-4-201ENST00000582223 153 ntBASIC21.31■■□□□ 1
CCDC148Q8NFR7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 AC024243.1-201ENST00000609234 778 ntBASIC21.31■■□□□ 1
CCDC148Q8NFR7 AL023973.1-201ENST00000624619 620 ntBASIC21.31■■□□□ 1
CCDC148Q8NFR7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC148Q8NFR7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC148Q8NFR7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 WIZP1-201ENST00000531444 2299 ntBASIC21.3■■□□□ 1
CCDC148Q8NFR7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 AC140113.3-201ENST00000605663 199 ntBASIC21.3■■□□□ 1
CCDC148Q8NFR7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCDC148Q8NFR7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC148Q8NFR7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 AC117947.1-201ENST00000427448 529 ntBASIC21.29■■□□□ 1
CCDC148Q8NFR7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 RN7SL850P-201ENST00000579959 291 ntBASIC21.29■■□□□ 1
CCDC148Q8NFR7 AC010240.3-201ENST00000607688 395 ntBASIC21.29■■□□□ 1
CCDC148Q8NFR7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.29■■□□□ 1
CCDC148Q8NFR7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC148Q8NFR7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC148Q8NFR7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.28■■□□□ 1
CCDC148Q8NFR7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms