Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 LIN28AP1-201ENST00000429574 405 ntBASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 AC112497.1-201ENST00000624824 639 ntBASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 SLC25A3P1-201ENST00000443844 931 ntBASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 MIR3180-4-201ENST00000582223 153 ntBASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRFBP1Q8NEF9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SRFBP1Q8NEF9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SRFBP1Q8NEF9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SRFBP1Q8NEF9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 LINC01023-201ENST00000606054 436 ntBASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AC012306.2-201ENST00000609350 630 ntBASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AC005363.2-201ENST00000618631 242 ntBASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRFBP1Q8NEF9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms