Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 ABCD1P5-201ENST00000445663 754 ntBASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 AL139288.1-201ENST00000623748 933 ntBASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC168Q8NDH2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 AC005829.1-201ENST00000570002 483 ntBASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC168Q8NDH2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AL512408.1-201ENST00000569378 2000 ntBASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 RCN1P2-201ENST00000398357 915 ntBASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AC009947.1-201ENST00000444350 727 ntBASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AP002472.1-201ENST00000577490 586 ntBASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AC093512.1-201ENST00000617969 520 ntBASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC168Q8NDH2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC168Q8NDH2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC168Q8NDH2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms