Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 LINC01311-201ENST00000565162 1445 ntBASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 HLA-F-220ENST00000434407 884 ntBASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 AC087388.1-201ENST00000571370 1112 ntBASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 AL136038.4-201ENST00000603606 1261 ntBASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC01555Q8NAE3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 ARMC10P1-201ENST00000313754 855 ntBASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 VENTXP5-201ENST00000523979 775 ntBASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01555Q8NAE3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.77■□□□□ 0.43
LINC01555Q8NAE3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01555Q8NAE3 AL020996.1-203ENST00000536896 2307 ntBASIC17.77■□□□□ 0.43
LINC01555Q8NAE3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01555Q8NAE3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01555Q8NAE3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms