Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 MIR4785-201ENST00000585005 73 ntBASIC18.11■□□□□ 0.49
CPSF7Q8N684 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 MYC-208ENST00000641036 567 ntBASIC18.11■□□□□ 0.49
CPSF7Q8N684 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CPSF7Q8N684 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPSF7Q8N684 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPSF7Q8N684 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CPSF7Q8N684 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 BX088651.1-201ENST00000540551 451 ntBASIC18.09■□□□□ 0.49
CPSF7Q8N684 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 AF186192.3-201ENST00000583427 947 ntBASIC18.09■□□□□ 0.49
CPSF7Q8N684 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 AC004264.1-201ENST00000608354 794 ntBASIC18.09■□□□□ 0.49
CPSF7Q8N684 REXO1L12P-201ENST00000622156 912 ntBASIC18.09■□□□□ 0.49
CPSF7Q8N684 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
CPSF7Q8N684 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPSF7Q8N684 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
CPSF7Q8N684 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms