Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 AC079776.4-201ENST00000511039 504 ntBASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 AC117500.6-201ENST00000624871 588 ntBASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPOQ8N3V7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 TREX1-205ENST00000625293 1783 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 BX323043.1-201ENST00000641006 1765 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 AC087289.5-201ENST00000586076 3175 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 FEM1AP3-201ENST00000403722 1741 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 MRPL3P1-201ENST00000400109 1033 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 REXO1L6P-202ENST00000619970 1078 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 AC006333.2-201ENST00000607957 2099 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 AC018445.3-201ENST00000624177 1945 ntBASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPOQ8N3V7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 HLA-A-201ENST00000376802 1334 ntBASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 POM121L3P-201ENST00000419331 1163 ntBASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPOQ8N3V7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNPOQ8N3V7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SYNPOQ8N3V7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNPOQ8N3V7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.77■□□□□ 0.59
SYNPOQ8N3V7 RNF165-205ENST00000588679 2904 ntBASIC18.77■□□□□ 0.59
SYNPOQ8N3V7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNPOQ8N3V7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms