Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 HTR7P1-202ENST00000624664 4411 ntBASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC116Q8IYX3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 KRT18P41-201ENST00000518924 1277 ntBASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC116Q8IYX3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 ECEL1P2-202ENST00000465689 757 ntBASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC116Q8IYX3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 AC090340.1-201ENST00000620778 4980 ntBASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 AC099343.3-201ENST00000605834 2503 ntBASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC116Q8IYX3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 AC007613.1-201ENST00000572811 2597 ntBASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms