Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TSPY15P-201ENST00000457163 923 ntBASIC22.92■■□□□ 1.26
SMC5Q8IY18 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 GMCL1P1-201ENST00000463439 1581 ntBASIC22.92■■□□□ 1.26
SMC5Q8IY18 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SMC5Q8IY18 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMC5Q8IY18 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
SMC5Q8IY18 AL096828.2-201ENST00000567259 1965 ntBASIC22.9■■□□□ 1.26
SMC5Q8IY18 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 TSPY14P-201ENST00000303979 915 ntBASIC22.9■■□□□ 1.26
SMC5Q8IY18 INGX-201ENST00000359239 846 ntBASIC22.9■■□□□ 1.26
SMC5Q8IY18 MIR149-201ENST00000384879 89 ntBASIC22.9■■□□□ 1.26
SMC5Q8IY18 MIR1238-201ENST00000408483 83 ntBASIC22.9■■□□□ 1.26
SMC5Q8IY18 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SMC5Q8IY18 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.9■■□□□ 1.26
SMC5Q8IY18 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.9■■□□□ 1.26
SMC5Q8IY18 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 PCDHB18P-201ENST00000524813 2368 ntBASIC22.9■■□□□ 1.26
SMC5Q8IY18 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.9■■□□□ 1.26
SMC5Q8IY18 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SMC5Q8IY18 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SMC5Q8IY18 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SMC5Q8IY18 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SMC5Q8IY18 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.89■■□□□ 1.26
SMC5Q8IY18 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.89■■□□□ 1.26
SMC5Q8IY18 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SMC5Q8IY18 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SMC5Q8IY18 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SMC5Q8IY18 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SMC5Q8IY18 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
SMC5Q8IY18 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
SMC5Q8IY18 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SMC5Q8IY18 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SMC5Q8IY18 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
SMC5Q8IY18 KRT18P23-201ENST00000435622 1283 ntBASIC22.89■■□□□ 1.25
SMC5Q8IY18 SLC25A6P5-201ENST00000435663 894 ntBASIC22.89■■□□□ 1.25
SMC5Q8IY18 CCR12P-201ENST00000446203 998 ntBASIC22.89■■□□□ 1.25
SMC5Q8IY18 BX088651.1-201ENST00000540551 451 ntBASIC22.89■■□□□ 1.25
SMC5Q8IY18 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.89■■□□□ 1.25
SMC5Q8IY18 AC009102.3-201ENST00000623118 1491 ntBASIC22.89■■□□□ 1.25
SMC5Q8IY18 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
SMC5Q8IY18 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.89■■□□□ 1.25
SMC5Q8IY18 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SMC5Q8IY18 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SMC5Q8IY18 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.89■■□□□ 1.25
SMC5Q8IY18 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SMC5Q8IY18 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 AC010653.2-201ENST00000623505 997 ntBASIC22.88■■□□□ 1.25
SMC5Q8IY18 AC116562.4-202ENST00000641738 218 ntBASIC22.88■■□□□ 1.25
SMC5Q8IY18 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.88■■□□□ 1.25
SMC5Q8IY18 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SMC5Q8IY18 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms