Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 TSPY5P-201ENST00000426936 936 ntBASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 AL163051.1-201ENST00000569214 1512 ntBASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SCUBE3Q8IX30 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 RNF152P1-201ENST00000397754 604 ntBASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCUBE3Q8IX30 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 AC010240.3-201ENST00000607688 395 ntBASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCUBE3Q8IX30 AC073592.3-201ENST00000625118 1834 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms