Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 MYC-208ENST00000641036 567 ntBASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 KRT8P45-201ENST00000414328 1447 ntBASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00346Q8IVM7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AL109659.2-201ENST00000606809 1674 ntBASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AL133373.2-201ENST00000623187 2828 ntBASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AL023284.2-201ENST00000405850 579 ntBASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00346Q8IVM7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.39■□□□□ 0.22
LINC00346Q8IVM7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 ABALON-201ENST00000629058 1903 ntBASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 MCCD1P1-208ENST00000445732 328 ntBASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 AC079598.2-202ENST00000546624 1451 ntBASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms