Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 AC134043.2-201ENST00000624206 2238 ntBASIC16.5■□□□□ 0.23
LRRC28Q86X40 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC28Q86X40 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRC28Q86X40 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 AC009053.2-201ENST00000563701 2365 ntBASIC16.49■□□□□ 0.23
LRRC28Q86X40 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRC28Q86X40 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC28Q86X40 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC28Q86X40 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC28Q86X40 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 AL596275.1-201ENST00000423464 877 ntBASIC16.47■□□□□ 0.23
LRRC28Q86X40 AL353807.1-201ENST00000427475 662 ntBASIC16.47■□□□□ 0.23
LRRC28Q86X40 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms