Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 AC026366.1-201ENST00000488803 879 ntBASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 AL160286.2-201ENST00000567150 934 ntBASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 AC135776.1-201ENST00000319817 2481 ntBASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 AL499627.1-201ENST00000569373 2188 ntBASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 KRT17P3-201ENST00000420566 1262 ntBASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 AC004264.1-201ENST00000608354 794 ntBASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 AC134043.2-201ENST00000624206 2238 ntBASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 GNAS-203ENST00000306120 1878 ntBASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCHD4Q6ZW05 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 TSPY23P-201ENST00000440136 739 ntBASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCHD4Q6ZW05 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms