Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PPP4R3AQ6IN85 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PPP4R3AQ6IN85 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
PPP4R3AQ6IN85 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
PPP4R3AQ6IN85 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 RNF152P1-201ENST00000397754 604 ntBASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 TSPY5P-201ENST00000426936 936 ntBASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PPP4R3AQ6IN85 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AL163051.1-201ENST00000569214 1512 ntBASIC21■□□□□ 0.95
PPP4R3AQ6IN85 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AK4P3-201ENST00000418260 669 ntBASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AC010240.3-201ENST00000607688 395 ntBASIC21■□□□□ 0.95
PPP4R3AQ6IN85 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PPP4R3AQ6IN85 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 MIR3917-201ENST00000580971 93 ntBASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 WIZP1-201ENST00000531444 2299 ntBASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 AC073592.3-201ENST00000625118 1834 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms