Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LPCAT4Q643R3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
LPCAT4Q643R3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.46■□□□□ 0.38
LPCAT4Q643R3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LPCAT4Q643R3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
LPCAT4Q643R3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 AC008556.1-201ENST00000610908 2040 ntBASIC17.45■□□□□ 0.38
LPCAT4Q643R3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 KRT18P61-201ENST00000585825 1298 ntBASIC17.45■□□□□ 0.38
LPCAT4Q643R3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.45■□□□□ 0.38
LPCAT4Q643R3 AC124283.5-201ENST00000624661 1809 ntBASIC17.44■□□□□ 0.38
LPCAT4Q643R3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 AL589743.5-201ENST00000616611 1050 ntBASIC17.44■□□□□ 0.38
LPCAT4Q643R3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.44■□□□□ 0.38
LPCAT4Q643R3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 RCC2P6-201ENST00000526625 1557 ntBASIC17.44■□□□□ 0.38
LPCAT4Q643R3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LPCAT4Q643R3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.43■□□□□ 0.38
LPCAT4Q643R3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms