Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AC245100.3-201ENST00000441281 285 ntBASIC17.91■□□□□ 0.46
RIF1Q5UIP0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AC093214.1-201ENST00000511688 1107 ntBASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AL359881.2-201ENST00000602973 570 ntBASIC17.91■□□□□ 0.46
RIF1Q5UIP0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.91■□□□□ 0.46
RIF1Q5UIP0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 AC009237.14-201ENST00000609975 1594 ntBASIC17.9■□□□□ 0.46
RIF1Q5UIP0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 HEIH-201ENST00000623091 1652 ntBASIC17.9■□□□□ 0.46
RIF1Q5UIP0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 AC069262.1-201ENST00000539058 672 ntBASIC17.9■□□□□ 0.46
RIF1Q5UIP0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
RIF1Q5UIP0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RIF1Q5UIP0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.89■□□□□ 0.46
RIF1Q5UIP0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
RIF1Q5UIP0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 AC002472.2-201ENST00000442739 958 ntBASIC17.89■□□□□ 0.45
RIF1Q5UIP0 CEND1P1-201ENST00000451006 455 ntBASIC17.89■□□□□ 0.45
RIF1Q5UIP0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 MTDHP4-201ENST00000600287 670 ntBASIC17.89■□□□□ 0.45
RIF1Q5UIP0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.89■□□□□ 0.45
RIF1Q5UIP0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 HCG4B-203ENST00000450128 991 ntBASIC17.88■□□□□ 0.45
RIF1Q5UIP0 AL513210.1-201ENST00000629608 234 ntBASIC17.88■□□□□ 0.45
RIF1Q5UIP0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.88■□□□□ 0.45
RIF1Q5UIP0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms