Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.7■□□□□ 0.42
SPIN4Q56A73 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPIN4Q56A73 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 FITM1-202ENST00000559294 800 ntBASIC17.69■□□□□ 0.42
SPIN4Q56A73 AL353719.1-201ENST00000566847 864 ntBASIC17.69■□□□□ 0.42
SPIN4Q56A73 MIR4674-201ENST00000582457 87 ntBASIC17.69■□□□□ 0.42
SPIN4Q56A73 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 AL023803.3-201ENST00000615559 522 ntBASIC17.69■□□□□ 0.42
SPIN4Q56A73 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.69■□□□□ 0.42
SPIN4Q56A73 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 KRT17P2-201ENST00000300992 1314 ntBASIC17.69■□□□□ 0.42
SPIN4Q56A73 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPIN4Q56A73 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 AC036111.1-201ENST00000533973 1582 ntBASIC17.68■□□□□ 0.42
SPIN4Q56A73 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 KRT8P50-201ENST00000562022 1438 ntBASIC17.68■□□□□ 0.42
SPIN4Q56A73 AP000525.1-201ENST00000608286 694 ntBASIC17.68■□□□□ 0.42
SPIN4Q56A73 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 NOC2LP1-202ENST00000452600 2235 ntBASIC17.68■□□□□ 0.42
SPIN4Q56A73 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SPIN4Q56A73 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPIN4Q56A73 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.67■□□□□ 0.42
SPIN4Q56A73 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 AP003041.3-201ENST00000527151 707 ntBASIC17.67■□□□□ 0.42
SPIN4Q56A73 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPIN4Q56A73 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.67■□□□□ 0.42
SPIN4Q56A73 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPIN4Q56A73 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPIN4Q56A73 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
SPIN4Q56A73 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPIN4Q56A73 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPIN4Q56A73 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPIN4Q56A73 KRT8P7-201ENST00000533003 1432 ntBASIC17.66■□□□□ 0.42
SPIN4Q56A73 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms