Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH17Q12864 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH17Q12864 AC116562.4-202ENST00000641738 218 ntBASIC18.72■□□□□ 0.59
CDH17Q12864 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH17Q12864 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 KRT8P50-201ENST00000562022 1438 ntBASIC18.72■□□□□ 0.59
CDH17Q12864 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH17Q12864 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDH17Q12864 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH17Q12864 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH17Q12864 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDH17Q12864 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH17Q12864 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 BX088651.1-201ENST00000540551 451 ntBASIC18.71■□□□□ 0.59
CDH17Q12864 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH17Q12864 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH17Q12864 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH17Q12864 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH17Q12864 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH17Q12864 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH17Q12864 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
CDH17Q12864 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.71■□□□□ 0.58
CDH17Q12864 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH17Q12864 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH17Q12864 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH17Q12864 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH17Q12864 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH17Q12864 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH17Q12864 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH17Q12864 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH17Q12864 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH17Q12864 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH17Q12864 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH17Q12864 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH17Q12864 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH17Q12864 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CDH17Q12864 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 KRT8P7-201ENST00000533003 1432 ntBASIC18.69■□□□□ 0.58
CDH17Q12864 HOXB1-202ENST00000577092 1414 ntBASIC18.69■□□□□ 0.58
CDH17Q12864 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH17Q12864 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH17Q12864 AC007663.1-201ENST00000438948 1240 ntBASIC18.69■□□□□ 0.58
CDH17Q12864 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 WWOX-216ENST00000569818 525 ntBASIC18.69■□□□□ 0.58
CDH17Q12864 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH17Q12864 CR769767.2-201ENST00000622735 460 ntBASIC18.69■□□□□ 0.58
CDH17Q12864 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH17Q12864 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH17Q12864 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH17Q12864 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH17Q12864 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH17Q12864 AC135776.1-201ENST00000319817 2481 ntBASIC18.68■□□□□ 0.58
CDH17Q12864 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH17Q12864 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH17Q12864 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDH17Q12864 TSPY14P-201ENST00000303979 915 ntBASIC18.68■□□□□ 0.58
CDH17Q12864 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms