Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SSBP1Q04837 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP1Q04837 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP1Q04837 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SSBP1Q04837 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SSBP1Q04837 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.67■□□□□ 0.1
SSBP1Q04837 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SSBP1Q04837 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP1Q04837 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SSBP1Q04837 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP1Q04837 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SSBP1Q04837 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SSBP1Q04837 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP1Q04837 HTR7P1-201ENST00000538670 1336 ntBASIC15.67■□□□□ 0.1
SSBP1Q04837 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SSBP1Q04837 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSBP1Q04837 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SSBP1Q04837 POU5F1P3-201ENST00000428824 1078 ntBASIC15.66■□□□□ 0.1
SSBP1Q04837 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.66■□□□□ 0.1
SSBP1Q04837 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.66■□□□□ 0.1
SSBP1Q04837 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.66■□□□□ 0.1
SSBP1Q04837 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SSBP1Q04837 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.66■□□□□ 0.1
SSBP1Q04837 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP1Q04837 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.66■□□□□ 0.1
SSBP1Q04837 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
SSBP1Q04837 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.66■□□□□ 0.1
SSBP1Q04837 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP1Q04837 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP1Q04837 GMCL1P1-201ENST00000463439 1581 ntBASIC15.66■□□□□ 0.1
SSBP1Q04837 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SSBP1Q04837 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSBP1Q04837 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP1Q04837 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP1Q04837 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 AP000593.1-201ENST00000393668 712 ntBASIC15.65■□□□□ 0.1
SSBP1Q04837 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 BX276092.2-201ENST00000417668 665 ntBASIC15.65■□□□□ 0.1
SSBP1Q04837 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP1Q04837 AC084018.2-201ENST00000613093 2607 ntBASIC15.65■□□□□ 0.1
SSBP1Q04837 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SSBP1Q04837 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP1Q04837 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms