Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RPL39P62891 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.1□□□□□ -0.31
RPL39P62891 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RPL39P62891 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 DUSP5P2-201ENST00000426873 1033 ntBASIC13.1□□□□□ -0.31
RPL39P62891 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.1□□□□□ -0.31
RPL39P62891 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
RPL39P62891 AF201337.1-201ENST00000520239 748 ntBASIC13.1□□□□□ -0.31
RPL39P62891 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.1□□□□□ -0.31
RPL39P62891 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.1□□□□□ -0.31
RPL39P62891 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RPL39P62891 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RPL39P62891 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.1□□□□□ -0.31
RPL39P62891 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL39P62891 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL39P62891 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
RPL39P62891 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.09□□□□□ -0.31
RPL39P62891 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RPL39P62891 AL160286.2-201ENST00000567150 934 ntBASIC13.09□□□□□ -0.31
RPL39P62891 MYC-208ENST00000641036 567 ntBASIC13.09□□□□□ -0.31
RPL39P62891 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RPL39P62891 SIRPAP1-201ENST00000448467 1770 ntBASIC13.09□□□□□ -0.31
RPL39P62891 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.09□□□□□ -0.31
RPL39P62891 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL39P62891 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.09□□□□□ -0.31
RPL39P62891 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.09□□□□□ -0.31
RPL39P62891 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL39P62891 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.09□□□□□ -0.31
RPL39P62891 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RPL39P62891 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.08□□□□□ -0.31
RPL39P62891 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RPL39P62891 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RPL39P62891 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL39P62891 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL39P62891 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RPL39P62891 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL39P62891 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RPL39P62891 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL39P62891 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.08□□□□□ -0.32
RPL39P62891 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RPL39P62891 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.08□□□□□ -0.32
RPL39P62891 AL645608.8-201ENST00000606034 2086 ntBASIC13.08□□□□□ -0.32
RPL39P62891 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms