Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.47■□□□□ 0.71
USP46P62068 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
USP46P62068 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP46P62068 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.47■□□□□ 0.71
USP46P62068 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.46■□□□□ 0.71
USP46P62068 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP46P62068 KRT8P50-201ENST00000562022 1438 ntBASIC19.46■□□□□ 0.71
USP46P62068 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.46■□□□□ 0.71
USP46P62068 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.46■□□□□ 0.71
USP46P62068 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.46■□□□□ 0.71
USP46P62068 AC093458.2-201ENST00000623150 629 ntBASIC19.46■□□□□ 0.71
USP46P62068 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
USP46P62068 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP46P62068 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.46■□□□□ 0.71
USP46P62068 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.45■□□□□ 0.7
USP46P62068 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.45■□□□□ 0.7
USP46P62068 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.45■□□□□ 0.7
USP46P62068 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.45■□□□□ 0.7
USP46P62068 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.45■□□□□ 0.7
USP46P62068 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.45■□□□□ 0.7
USP46P62068 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.45■□□□□ 0.7
USP46P62068 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.45■□□□□ 0.7
USP46P62068 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP46P62068 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP46P62068 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP46P62068 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.44■□□□□ 0.7
USP46P62068 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.44■□□□□ 0.7
USP46P62068 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.44■□□□□ 0.7
USP46P62068 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.44■□□□□ 0.7
USP46P62068 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.44■□□□□ 0.7
USP46P62068 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.44■□□□□ 0.7
USP46P62068 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.44■□□□□ 0.7
USP46P62068 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.44■□□□□ 0.7
USP46P62068 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.44■□□□□ 0.7
USP46P62068 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.44■□□□□ 0.7
USP46P62068 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP46P62068 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.43■□□□□ 0.7
USP46P62068 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.43■□□□□ 0.7
USP46P62068 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
USP46P62068 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.43■□□□□ 0.7
USP46P62068 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.43■□□□□ 0.7
USP46P62068 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.43■□□□□ 0.7
USP46P62068 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.43■□□□□ 0.7
USP46P62068 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.43■□□□□ 0.7
USP46P62068 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.43■□□□□ 0.7
USP46P62068 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.43■□□□□ 0.7
USP46P62068 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 AL162741.1-201ENST00000565563 1558 ntBASIC19.43■□□□□ 0.7
USP46P62068 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.43■□□□□ 0.7
USP46P62068 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 AC099343.3-201ENST00000605834 2503 ntBASIC19.43■□□□□ 0.7
USP46P62068 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP46P62068 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP46P62068 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
USP46P62068 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms