Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00315P59091 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00315P59091 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00315P59091 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00315P59091 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 MYLKP1-201ENST00000509077 1580 ntBASIC13.34□□□□□ -0.27
LINC00315P59091 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00315P59091 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 KRT16P5-201ENST00000455284 522 ntBASIC13.34□□□□□ -0.27
LINC00315P59091 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00315P59091 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LINC00315P59091 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00315P59091 MIR4785-201ENST00000585005 73 ntBASIC13.34□□□□□ -0.27
LINC00315P59091 AL445675.2-201ENST00000620291 557 ntBASIC13.34□□□□□ -0.27
LINC00315P59091 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00315P59091 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 REXO1L9P-201ENST00000604264 2108 ntBASIC13.34□□□□□ -0.27
LINC00315P59091 HTR7P1-201ENST00000538670 1336 ntBASIC13.34□□□□□ -0.27
LINC00315P59091 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00315P59091 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00315P59091 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00315P59091 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
LINC00315P59091 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
LINC00315P59091 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.33□□□□□ -0.28
LINC00315P59091 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 KRT18P41-201ENST00000518924 1277 ntBASIC13.33□□□□□ -0.28
LINC00315P59091 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 AC113410.3-201ENST00000623366 203 ntBASIC13.33□□□□□ -0.28
LINC00315P59091 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00315P59091 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00315P59091 KRT17P2-201ENST00000300992 1314 ntBASIC13.33□□□□□ -0.28
LINC00315P59091 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00315P59091 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00315P59091 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00315P59091 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00315P59091 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00315P59091 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00315P59091 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
LINC00315P59091 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00315P59091 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 FZD10-202ENST00000539839 3282 ntBASIC13.32□□□□□ -0.28
LINC00315P59091 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00315P59091 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00315P59091 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00315P59091 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00315P59091 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00315P59091 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00315P59091 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms