Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN6P56747 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CLDN6P56747 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN6P56747 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN6P56747 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN6P56747 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN6P56747 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN6P56747 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN6P56747 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN6P56747 AC099343.3-201ENST00000605834 2503 ntBASIC17.76■□□□□ 0.43
CLDN6P56747 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN6P56747 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN6P56747 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN6P56747 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN6P56747 TREX1-205ENST00000625293 1783 ntBASIC17.76■□□□□ 0.43
CLDN6P56747 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN6P56747 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN6P56747 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN6P56747 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN6P56747 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN6P56747 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 AFG3L1P-217ENST00000557444 2447 ntBASIC17.75■□□□□ 0.43
CLDN6P56747 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLDN6P56747 MINOS1P3-201ENST00000457048 203 ntBASIC17.75■□□□□ 0.43
CLDN6P56747 GUSBP12-201ENST00000513727 720 ntBASIC17.75■□□□□ 0.43
CLDN6P56747 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.75■□□□□ 0.43
CLDN6P56747 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 AL049840.3-201ENST00000602669 611 ntBASIC17.75■□□□□ 0.43
CLDN6P56747 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.75■□□□□ 0.43
CLDN6P56747 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN6P56747 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN6P56747 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.74■□□□□ 0.43
CLDN6P56747 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLDN6P56747 AL773604.1-201ENST00000617417 272 ntBASIC17.74■□□□□ 0.43
CLDN6P56747 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLDN6P56747 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 AC243591.1-201ENST00000452967 1364 ntBASIC17.74■□□□□ 0.43
CLDN6P56747 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLDN6P56747 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.74■□□□□ 0.43
CLDN6P56747 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLDN6P56747 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN6P56747 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.73■□□□□ 0.43
CLDN6P56747 AL031284.1-201ENST00000419297 478 ntBASIC17.73■□□□□ 0.43
CLDN6P56747 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN6P56747 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN6P56747 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN6P56747 AC024563.2-201ENST00000603282 481 ntBASIC17.73■□□□□ 0.43
CLDN6P56747 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.73■□□□□ 0.43
CLDN6P56747 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.73■□□□□ 0.43
CLDN6P56747 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
CLDN6P56747 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
CLDN6P56747 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDN6P56747 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms