Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.56■□□□□ 0.4
NR1H2P55055 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NR1H2P55055 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
NR1H2P55055 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NR1H2P55055 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 SLC25A6P5-201ENST00000435663 894 ntBASIC17.55■□□□□ 0.4
NR1H2P55055 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NR1H2P55055 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.55■□□□□ 0.4
NR1H2P55055 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.55■□□□□ 0.4
NR1H2P55055 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.55■□□□□ 0.4
NR1H2P55055 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 AC120498.8-201ENST00000614275 531 ntBASIC17.55■□□□□ 0.4
NR1H2P55055 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.55■□□□□ 0.4
NR1H2P55055 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NR1H2P55055 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NR1H2P55055 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NR1H2P55055 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 AD000864.1-201ENST00000624076 2295 ntBASIC17.55■□□□□ 0.4
NR1H2P55055 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.55■□□□□ 0.4
NR1H2P55055 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NR1H2P55055 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
NR1H2P55055 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.54■□□□□ 0.4
NR1H2P55055 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
NR1H2P55055 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NR1H2P55055 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.53■□□□□ 0.4
NR1H2P55055 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.53■□□□□ 0.4
NR1H2P55055 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.53■□□□□ 0.4
NR1H2P55055 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
NR1H2P55055 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms