Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.24■□□□□ 0.35
PSMD4P55036 HMGA1P5-201ENST00000412453 271 ntBASIC17.24■□□□□ 0.35
PSMD4P55036 AC087499.1-201ENST00000418141 1075 ntBASIC17.24■□□□□ 0.35
PSMD4P55036 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.24■□□□□ 0.35
PSMD4P55036 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.24■□□□□ 0.35
PSMD4P55036 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PSMD4P55036 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.24■□□□□ 0.35
PSMD4P55036 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PSMD4P55036 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.24■□□□□ 0.35
PSMD4P55036 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PSMD4P55036 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.24■□□□□ 0.35
PSMD4P55036 AL357033.4-201ENST00000617703 1807 ntBASIC17.24■□□□□ 0.35
PSMD4P55036 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.23■□□□□ 0.35
PSMD4P55036 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 KRT8P9-201ENST00000558927 1449 ntBASIC17.23■□□□□ 0.35
PSMD4P55036 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.23■□□□□ 0.35
PSMD4P55036 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PSMD4P55036 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 AC034236.2-201ENST00000606662 1610 ntBASIC17.23■□□□□ 0.35
PSMD4P55036 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.23■□□□□ 0.35
PSMD4P55036 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 MIR564-202ENST00000385049 94 ntBASIC17.23■□□□□ 0.35
PSMD4P55036 WWOX-216ENST00000569818 525 ntBASIC17.23■□□□□ 0.35
PSMD4P55036 AC145285.6-201ENST00000604632 637 ntBASIC17.23■□□□□ 0.35
PSMD4P55036 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PSMD4P55036 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PSMD4P55036 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 KRT8P45-201ENST00000414328 1447 ntBASIC17.22■□□□□ 0.35
PSMD4P55036 KRT8P7-201ENST00000533003 1432 ntBASIC17.22■□□□□ 0.35
PSMD4P55036 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 AP000593.1-201ENST00000393668 712 ntBASIC17.22■□□□□ 0.35
PSMD4P55036 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.22■□□□□ 0.35
PSMD4P55036 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.22■□□□□ 0.35
PSMD4P55036 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PSMD4P55036 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.22■□□□□ 0.35
PSMD4P55036 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.22■□□□□ 0.35
PSMD4P55036 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.22■□□□□ 0.35
PSMD4P55036 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.22■□□□□ 0.35
PSMD4P55036 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PSMD4P55036 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PSMD4P55036 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PSMD4P55036 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PSMD4P55036 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.21■□□□□ 0.35
PSMD4P55036 AC090164.3-201ENST00000610780 2143 ntBASIC17.21■□□□□ 0.35
PSMD4P55036 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PSMD4P55036 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms