Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN2P51788 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CLCN2P51788 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN2P51788 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.94■□□□□ 0.46
CLCN2P51788 AC011298.2-201ENST00000617989 482 ntBASIC17.94■□□□□ 0.46
CLCN2P51788 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.94■□□□□ 0.46
CLCN2P51788 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.93■□□□□ 0.46
CLCN2P51788 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN2P51788 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN2P51788 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLCN2P51788 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCN2P51788 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN2P51788 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN2P51788 AP000525.1-201ENST00000608286 694 ntBASIC17.93■□□□□ 0.46
CLCN2P51788 AC130371.2-201ENST00000619443 611 ntBASIC17.93■□□□□ 0.46
CLCN2P51788 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN2P51788 AC020763.4-201ENST00000623414 4170 ntBASIC17.93■□□□□ 0.46
CLCN2P51788 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCN2P51788 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCN2P51788 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCN2P51788 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLCN2P51788 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLCN2P51788 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 MIR1238-201ENST00000408483 83 ntBASIC17.92■□□□□ 0.46
CLCN2P51788 AC087499.1-201ENST00000418141 1075 ntBASIC17.92■□□□□ 0.46
CLCN2P51788 Z85996.1-201ENST00000494644 937 ntBASIC17.92■□□□□ 0.46
CLCN2P51788 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCN2P51788 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCN2P51788 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCN2P51788 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLCN2P51788 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCN2P51788 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN2P51788 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN2P51788 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN2P51788 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN2P51788 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN2P51788 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLCN2P51788 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms