Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 AC093525.10-201ENST00000625130 1569 ntBASIC20.42■□□□□ 0.86
GPC3P51654 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
GPC3P51654 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
GPC3P51654 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.42■□□□□ 0.86
GPC3P51654 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 MIR3180-4-201ENST00000582223 153 ntBASIC20.42■□□□□ 0.86
GPC3P51654 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 NPAP1P7-201ENST00000613027 823 ntBASIC20.42■□□□□ 0.86
GPC3P51654 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.42■□□□□ 0.86
GPC3P51654 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.42■□□□□ 0.86
GPC3P51654 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.42■□□□□ 0.86
GPC3P51654 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GPC3P51654 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
GPC3P51654 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
GPC3P51654 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC3P51654 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.41■□□□□ 0.86
GPC3P51654 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.41■□□□□ 0.86
GPC3P51654 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.41■□□□□ 0.86
GPC3P51654 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.41■□□□□ 0.86
GPC3P51654 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC3P51654 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC3P51654 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GPC3P51654 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.41■□□□□ 0.86
GPC3P51654 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.41■□□□□ 0.86
GPC3P51654 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC3P51654 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GPC3P51654 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.4■□□□□ 0.86
GPC3P51654 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC3P51654 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC3P51654 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GPC3P51654 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GPC3P51654 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GPC3P51654 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC3P51654 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GPC3P51654 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.4■□□□□ 0.86
GPC3P51654 PVRIG2P-201ENST00000435460 978 ntBASIC20.4■□□□□ 0.86
GPC3P51654 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
GPC3P51654 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GPC3P51654 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.4■□□□□ 0.86
GPC3P51654 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.4■□□□□ 0.86
GPC3P51654 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC3P51654 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GPC3P51654 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
GPC3P51654 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.39■□□□□ 0.86
GPC3P51654 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
GPC3P51654 AL031598.1-201ENST00000561511 1773 ntBASIC20.39■□□□□ 0.86
GPC3P51654 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC3P51654 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC3P51654 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GPC3P51654 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC3P51654 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.39■□□□□ 0.85
GPC3P51654 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 AC016734.2-201ENST00000624325 1377 ntBASIC20.39■□□□□ 0.85
GPC3P51654 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.39■□□□□ 0.85
GPC3P51654 KRT18P48-201ENST00000434763 852 ntBASIC20.39■□□□□ 0.85
GPC3P51654 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.39■□□□□ 0.85
GPC3P51654 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.39■□□□□ 0.85
GPC3P51654 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.39■□□□□ 0.85
GPC3P51654 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
GPC3P51654 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
GPC3P51654 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC3P51654 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms