Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC011840.4-201ENST00000578471 627 ntBASIC20.84■□□□□ 0.93
CENPFP49454 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CENPFP49454 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CENPFP49454 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.83■□□□□ 0.93
CENPFP49454 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CENPFP49454 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.83■□□□□ 0.93
CENPFP49454 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CENPFP49454 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.83■□□□□ 0.93
CENPFP49454 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CENPFP49454 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.83■□□□□ 0.93
CENPFP49454 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.83■□□□□ 0.93
CENPFP49454 AC009533.2-201ENST00000543664 586 ntBASIC20.83■□□□□ 0.93
CENPFP49454 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.83■□□□□ 0.93
CENPFP49454 AC040169.1-201ENST00000565382 521 ntBASIC20.83■□□□□ 0.93
CENPFP49454 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CENPFP49454 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CENPFP49454 Z82202.1-201ENST00000623446 1880 ntBASIC20.83■□□□□ 0.93
CENPFP49454 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.92
CENPFP49454 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.83■□□□□ 0.92
CENPFP49454 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CENPFP49454 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CENPFP49454 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.82■□□□□ 0.92
CENPFP49454 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.82■□□□□ 0.92
CENPFP49454 AC024563.2-201ENST00000603282 481 ntBASIC20.82■□□□□ 0.92
CENPFP49454 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CENPFP49454 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CENPFP49454 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CENPFP49454 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.82■□□□□ 0.92
CENPFP49454 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.82■□□□□ 0.92
CENPFP49454 RNA5SP415-201ENST00000517246 115 ntBASIC20.82■□□□□ 0.92
CENPFP49454 AC002347.1-201ENST00000569543 541 ntBASIC20.82■□□□□ 0.92
CENPFP49454 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CENPFP49454 AC034236.2-201ENST00000606662 1610 ntBASIC20.82■□□□□ 0.92
CENPFP49454 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CENPFP49454 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CENPFP49454 AC007967.2-201ENST00000432613 625 ntBASIC20.82■□□□□ 0.92
CENPFP49454 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 TEX21P-204ENST00000641479 1693 ntBASIC20.81■□□□□ 0.92
CENPFP49454 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.81■□□□□ 0.92
CENPFP49454 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CENPFP49454 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.8■□□□□ 0.92
CENPFP49454 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.8■□□□□ 0.92
CENPFP49454 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.8■□□□□ 0.92
CENPFP49454 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CENPFP49454 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.8■□□□□ 0.92
CENPFP49454 CNN2P11-201ENST00000429351 262 ntBASIC20.8■□□□□ 0.92
CENPFP49454 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.8■□□□□ 0.92
CENPFP49454 YBX1P5-201ENST00000509441 847 ntBASIC20.8■□□□□ 0.92
CENPFP49454 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.8■□□□□ 0.92
CENPFP49454 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.8■□□□□ 0.92
CENPFP49454 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CENPFP49454 HLA-J-201ENST00000462773 1622 ntBASIC20.8■□□□□ 0.92
CENPFP49454 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.8■□□□□ 0.92
CENPFP49454 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CENPFP49454 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CENPFP49454 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms