Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 FER1L4-210ENST00000615531 5998 ntBASIC15.25■□□□□ 0.03
SNCAP37840 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNCAP37840 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SNCAP37840 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.25■□□□□ 0.03
SNCAP37840 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.25■□□□□ 0.03
SNCAP37840 TSPY6P-201ENST00000448518 926 ntBASIC15.25■□□□□ 0.03
SNCAP37840 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SNCAP37840 AC120498.8-201ENST00000614275 531 ntBASIC15.25■□□□□ 0.03
SNCAP37840 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.25■□□□□ 0.03
SNCAP37840 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.25■□□□□ 0.03
SNCAP37840 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNCAP37840 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.25■□□□□ 0.03
SNCAP37840 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 AC012317.2-201ENST00000623305 2251 ntBASIC15.24■□□□□ 0.03
SNCAP37840 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 ANO7L1-203ENST00000602586 1720 ntBASIC15.24■□□□□ 0.03
SNCAP37840 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNCAP37840 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.24■□□□□ 0.03
SNCAP37840 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.24■□□□□ 0.03
SNCAP37840 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.24■□□□□ 0.03
SNCAP37840 KRT18P16-201ENST00000510337 1294 ntBASIC15.24■□□□□ 0.03
SNCAP37840 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.24■□□□□ 0.03
SNCAP37840 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.24■□□□□ 0.03
SNCAP37840 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNCAP37840 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNCAP37840 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.24■□□□□ 0.03
SNCAP37840 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNCAP37840 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNCAP37840 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.23■□□□□ 0.03
SNCAP37840 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
SNCAP37840 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SNCAP37840 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.23■□□□□ 0.03
SNCAP37840 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.23■□□□□ 0.03
SNCAP37840 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SNCAP37840 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.23■□□□□ 0.03
SNCAP37840 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.23■□□□□ 0.03
SNCAP37840 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 NCF1B-203ENST00000435988 1254 ntBASIC15.23■□□□□ 0.03
SNCAP37840 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
SNCAP37840 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.23■□□□□ 0.03
SNCAP37840 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.23■□□□□ 0.03
SNCAP37840 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.23■□□□□ 0.03
SNCAP37840 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.23■□□□□ 0.03
SNCAP37840 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SNCAP37840 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.23■□□□□ 0.03
SNCAP37840 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.23■□□□□ 0.03
SNCAP37840 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNCAP37840 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms