Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA3P29320 AC008403.3-201ENST00000598924 454 ntBASIC18.04■□□□□ 0.48
EPHA3P29320 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA3P29320 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA3P29320 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
EPHA3P29320 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA3P29320 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
EPHA3P29320 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
EPHA3P29320 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EPHA3P29320 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.03■□□□□ 0.48
EPHA3P29320 MTDHP1-201ENST00000605323 784 ntBASIC18.03■□□□□ 0.48
EPHA3P29320 AL109923.1-201ENST00000618799 583 ntBASIC18.03■□□□□ 0.48
EPHA3P29320 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.03■□□□□ 0.48
EPHA3P29320 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
EPHA3P29320 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EPHA3P29320 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.03■□□□□ 0.48
EPHA3P29320 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.03■□□□□ 0.48
EPHA3P29320 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EPHA3P29320 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHA3P29320 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
EPHA3P29320 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA3P29320 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA3P29320 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
EPHA3P29320 PRSS44-201ENST00000515154 1146 ntBASIC18.02■□□□□ 0.48
EPHA3P29320 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHA3P29320 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.02■□□□□ 0.48
EPHA3P29320 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 AC099398.1-201ENST00000567919 2776 ntBASIC18.02■□□□□ 0.48
EPHA3P29320 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EPHA3P29320 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.02■□□□□ 0.48
EPHA3P29320 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA3P29320 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA3P29320 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA3P29320 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA3P29320 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA3P29320 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.02■□□□□ 0.47
EPHA3P29320 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EPHA3P29320 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
EPHA3P29320 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
EPHA3P29320 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA3P29320 SLC25A6P5-201ENST00000435663 894 ntBASIC18.01■□□□□ 0.47
EPHA3P29320 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.01■□□□□ 0.47
EPHA3P29320 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.01■□□□□ 0.47
EPHA3P29320 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.01■□□□□ 0.47
EPHA3P29320 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.01■□□□□ 0.47
EPHA3P29320 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EPHA3P29320 RCC2P3-201ENST00000418112 1537 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms