Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.17■■□□□ 1.46
RXRBP28702 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RXRBP28702 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RXRBP28702 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.17■■□□□ 1.46
RXRBP28702 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.17■■□□□ 1.46
RXRBP28702 TERF1P3-201ENST00000505638 1227 ntBASIC24.17■■□□□ 1.46
RXRBP28702 AC136632.2-201ENST00000512891 861 ntBASIC24.17■■□□□ 1.46
RXRBP28702 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC24.17■■□□□ 1.46
RXRBP28702 AC004835.2-201ENST00000603762 682 ntBASIC24.17■■□□□ 1.46
RXRBP28702 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RXRBP28702 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC24.17■■□□□ 1.46
RXRBP28702 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RXRBP28702 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RXRBP28702 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RXRBP28702 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.17■■□□□ 1.46
RXRBP28702 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.16■■□□□ 1.46
RXRBP28702 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.16■■□□□ 1.46
RXRBP28702 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC24.16■■□□□ 1.46
RXRBP28702 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC24.16■■□□□ 1.46
RXRBP28702 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC24.16■■□□□ 1.46
RXRBP28702 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RXRBP28702 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC24.16■■□□□ 1.46
RXRBP28702 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC24.16■■□□□ 1.46
RXRBP28702 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RXRBP28702 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC24.15■■□□□ 1.46
RXRBP28702 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 STOM-202ENST00000347359 870 ntTSL 2 BASIC24.15■■□□□ 1.46
RXRBP28702 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC24.15■■□□□ 1.46
RXRBP28702 SRP19-202ENST00000445150 833 ntTSL 2 BASIC24.15■■□□□ 1.46
RXRBP28702 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.15■■□□□ 1.46
RXRBP28702 DAD1-205ENST00000543337 501 ntTSL 3 BASIC24.15■■□□□ 1.46
RXRBP28702 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.15■■□□□ 1.46
RXRBP28702 AL390955.2-201ENST00000603032 514 ntBASIC24.15■■□□□ 1.46
RXRBP28702 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RXRBP28702 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
RXRBP28702 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.15■■□□□ 1.46
RXRBP28702 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RXRBP28702 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.15■■□□□ 1.46
RXRBP28702 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RXRBP28702 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
RXRBP28702 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
RXRBP28702 FBXW4P1-201ENST00000426721 2239 ntBASIC24.14■■□□□ 1.46
RXRBP28702 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
RXRBP28702 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC24.14■■□□□ 1.45
RXRBP28702 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RXRBP28702 BAD-202ENST00000394531 631 ntTSL 3 BASIC24.14■■□□□ 1.45
RXRBP28702 AC236430.1-201ENST00000402231 743 ntBASIC24.14■■□□□ 1.45
RXRBP28702 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC24.14■■□□□ 1.45
RXRBP28702 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RXRBP28702 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24.14■■□□□ 1.45
RXRBP28702 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC24.14■■□□□ 1.45
RXRBP28702 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC24.14■■□□□ 1.45
RXRBP28702 INGX-202ENST00000489074 768 ntBASIC24.14■■□□□ 1.45
RXRBP28702 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RXRBP28702 AC093520.2-201ENST00000561830 333 ntBASIC24.14■■□□□ 1.45
RXRBP28702 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC24.14■■□□□ 1.45
RXRBP28702 AC233723.2-201ENST00000623798 2106 ntBASIC24.14■■□□□ 1.45
RXRBP28702 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.14■■□□□ 1.45
RXRBP28702 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RXRBP28702 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RXRBP28702 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RXRBP28702 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RXRBP28702 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC24.13■■□□□ 1.45
RXRBP28702 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RXRBP28702 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC24.13■■□□□ 1.45
RXRBP28702 FAM86GP-201ENST00000448322 971 ntBASIC24.13■■□□□ 1.45
RXRBP28702 OARD1-208ENST00000469104 704 ntTSL 2 BASIC24.13■■□□□ 1.45
RXRBP28702 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.13■■□□□ 1.45
RXRBP28702 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC24.13■■□□□ 1.45
RXRBP28702 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RXRBP28702 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RXRBP28702 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RXRBP28702 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RXRBP28702 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RXRBP28702 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RXRBP28702 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RXRBP28702 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RXRBP28702 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RXRBP28702 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RXRBP28702 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RXRBP28702 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms