Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.6■□□□□ 0.57
KRT4P19013 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT4P19013 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT4P19013 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT4P19013 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.6■□□□□ 0.57
KRT4P19013 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT4P19013 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT4P19013 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT4P19013 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT4P19013 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT4P19013 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT4P19013 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KRT4P19013 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT4P19013 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT4P19013 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT4P19013 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.59■□□□□ 0.57
KRT4P19013 AL138781.1-201ENST00000566567 1274 ntBASIC18.59■□□□□ 0.57
KRT4P19013 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT4P19013 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT4P19013 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT4P19013 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT4P19013 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRT4P19013 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT4P19013 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KRT4P19013 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT4P19013 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.58■□□□□ 0.57
KRT4P19013 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT4P19013 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.58■□□□□ 0.57
KRT4P19013 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KRT4P19013 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
KRT4P19013 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
KRT4P19013 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
KRT4P19013 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
KRT4P19013 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.58■□□□□ 0.56
KRT4P19013 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.58■□□□□ 0.56
KRT4P19013 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT4P19013 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.58■□□□□ 0.56
KRT4P19013 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.56
KRT4P19013 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.58■□□□□ 0.56
KRT4P19013 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
KRT4P19013 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
KRT4P19013 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
KRT4P19013 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KRT4P19013 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
KRT4P19013 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KRT4P19013 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT4P19013 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.57■□□□□ 0.56
KRT4P19013 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 MYLKP1-201ENST00000509077 1580 ntBASIC18.57■□□□□ 0.56
KRT4P19013 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
KRT4P19013 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KRT4P19013 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT4P19013 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.57■□□□□ 0.56
KRT4P19013 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.57■□□□□ 0.56
KRT4P19013 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KRT4P19013 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms