Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
PCNAP12004 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.06■□□□□ 0.48
PCNAP12004 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCNAP12004 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.06■□□□□ 0.48
PCNAP12004 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.06■□□□□ 0.48
PCNAP12004 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.06■□□□□ 0.48
PCNAP12004 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.05■□□□□ 0.48
PCNAP12004 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCNAP12004 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.05■□□□□ 0.48
PCNAP12004 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.05■□□□□ 0.48
PCNAP12004 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.05■□□□□ 0.48
PCNAP12004 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.05■□□□□ 0.48
PCNAP12004 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNAP12004 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
PCNAP12004 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNAP12004 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCNAP12004 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCNAP12004 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 MTMR9LP-203ENST00000426597 1545 ntBASIC18.04■□□□□ 0.48
PCNAP12004 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 AC079598.2-202ENST00000546624 1451 ntBASIC18.04■□□□□ 0.48
PCNAP12004 UNC93B2-201ENST00000285383 730 ntBASIC18.04■□□□□ 0.48
PCNAP12004 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 PKD1P1-201ENST00000458669 6805 ntBASIC18.04■□□□□ 0.48
PCNAP12004 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.04■□□□□ 0.48
PCNAP12004 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNAP12004 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNAP12004 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCNAP12004 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNAP12004 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCNAP12004 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.03■□□□□ 0.48
PCNAP12004 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCNAP12004 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNAP12004 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNAP12004 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.03■□□□□ 0.48
PCNAP12004 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNAP12004 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNAP12004 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.03■□□□□ 0.48
PCNAP12004 RBM17P1-201ENST00000453646 1190 ntBASIC18.03■□□□□ 0.48
PCNAP12004 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms