Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.59■□□□□ 0.57
THRAP10827 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.59■□□□□ 0.57
THRAP10827 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
THRAP10827 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THRAP10827 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
THRAP10827 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THRAP10827 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
THRAP10827 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
THRAP10827 AC020916.1-201ENST00000587762 1774 ntBASIC18.58■□□□□ 0.57
THRAP10827 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.58■□□□□ 0.57
THRAP10827 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
THRAP10827 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THRAP10827 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.58■□□□□ 0.56
THRAP10827 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
THRAP10827 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THRAP10827 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
THRAP10827 SLC25A1P2-201ENST00000430693 912 ntBASIC18.58■□□□□ 0.56
THRAP10827 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
THRAP10827 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.58■□□□□ 0.56
THRAP10827 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
THRAP10827 AC006011.2-201ENST00000621313 1158 ntBASIC18.58■□□□□ 0.56
THRAP10827 AC116562.4-202ENST00000641738 218 ntBASIC18.58■□□□□ 0.56
THRAP10827 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.58■□□□□ 0.56
THRAP10827 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.58■□□□□ 0.56
THRAP10827 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
THRAP10827 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
THRAP10827 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THRAP10827 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.58■□□□□ 0.56
THRAP10827 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THRAP10827 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.58■□□□□ 0.56
THRAP10827 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
THRAP10827 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THRAP10827 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
THRAP10827 FZD10-202ENST00000539839 3282 ntBASIC18.57■□□□□ 0.56
THRAP10827 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
THRAP10827 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 HMGA1P5-201ENST00000412453 271 ntBASIC18.57■□□□□ 0.56
THRAP10827 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.57■□□□□ 0.56
THRAP10827 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 CCR12P-201ENST00000446203 998 ntBASIC18.57■□□□□ 0.56
THRAP10827 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.57■□□□□ 0.56
THRAP10827 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
THRAP10827 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.57■□□□□ 0.56
THRAP10827 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THRAP10827 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
THRAP10827 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
THRAP10827 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.56■□□□□ 0.56
THRAP10827 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.56■□□□□ 0.56
THRAP10827 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THRAP10827 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.56■□□□□ 0.56
THRAP10827 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.56■□□□□ 0.56
THRAP10827 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
THRAP10827 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.56■□□□□ 0.56
THRAP10827 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.56■□□□□ 0.56
THRAP10827 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THRAP10827 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
THRAP10827 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
THRAP10827 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.55■□□□□ 0.56
THRAP10827 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.55■□□□□ 0.56
THRAP10827 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.55■□□□□ 0.56
THRAP10827 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 AC068880.1-201ENST00000507289 2297 ntBASIC18.55■□□□□ 0.56
THRAP10827 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THRAP10827 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.55■□□□□ 0.56
THRAP10827 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.55■□□□□ 0.56
THRAP10827 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
THRAP10827 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
THRAP10827 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms