Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PTPRFP10586 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 SCARNA2-201ENST00000458748 420 ntBASIC21.21■□□□□ 0.99
PTPRFP10586 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPRFP10586 AL049840.3-201ENST00000602669 611 ntBASIC21.21■□□□□ 0.99
PTPRFP10586 AL355877.3-201ENST00000622820 899 ntBASIC21.21■□□□□ 0.99
PTPRFP10586 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PTPRFP10586 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPRFP10586 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.21■□□□□ 0.99
PTPRFP10586 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPRFP10586 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
PTPRFP10586 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPRFP10586 KRT18P13-201ENST00000400056 1290 ntBASIC21.2■□□□□ 0.98
PTPRFP10586 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.2■□□□□ 0.98
PTPRFP10586 RNPS1P1-201ENST00000507437 918 ntBASIC21.2■□□□□ 0.98
PTPRFP10586 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 AC117500.6-201ENST00000624871 588 ntBASIC21.2■□□□□ 0.98
PTPRFP10586 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.2■□□□□ 0.98
PTPRFP10586 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.2■□□□□ 0.98
PTPRFP10586 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPRFP10586 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PTPRFP10586 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.19■□□□□ 0.98
PTPRFP10586 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.19■□□□□ 0.98
PTPRFP10586 AC106730.1-201ENST00000566722 1090 ntBASIC21.19■□□□□ 0.98
PTPRFP10586 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 AL032819.2-201ENST00000624543 2162 ntBASIC21.19■□□□□ 0.98
PTPRFP10586 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPRFP10586 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.19■□□□□ 0.98
PTPRFP10586 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPRFP10586 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPRFP10586 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTPRFP10586 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.18■□□□□ 0.98
PTPRFP10586 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTPRFP10586 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTPRFP10586 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PTPRFP10586 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPRFP10586 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPRFP10586 AL591684.3-201ENST00000605187 298 ntBASIC21.18■□□□□ 0.98
PTPRFP10586 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 AC112777.1-201ENST00000540175 1423 ntBASIC21.18■□□□□ 0.98
PTPRFP10586 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTPRFP10586 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPRFP10586 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPRFP10586 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.18■□□□□ 0.98
PTPRFP10586 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.17■□□□□ 0.98
PTPRFP10586 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.17■□□□□ 0.98
PTPRFP10586 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.17■□□□□ 0.98
PTPRFP10586 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPRFP10586 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPRFP10586 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PTPRFP10586 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 AL049812.1-201ENST00000432563 2267 ntBASIC21.17■□□□□ 0.98
PTPRFP10586 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPRFP10586 RBM17P3-201ENST00000417687 1192 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms