Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.27■□□□□ 0.19
UBCP0CG48 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
UBCP0CG48 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBCP0CG48 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.26■□□□□ 0.19
UBCP0CG48 HTR7P1-201ENST00000538670 1336 ntBASIC16.26■□□□□ 0.19
UBCP0CG48 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.26■□□□□ 0.19
UBCP0CG48 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 RN7SL471P-201ENST00000580476 299 ntBASIC16.26■□□□□ 0.19
UBCP0CG48 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBCP0CG48 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.26■□□□□ 0.19
UBCP0CG48 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBCP0CG48 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.26■□□□□ 0.19
UBCP0CG48 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 KRT16P1-201ENST00000399124 1418 ntBASIC16.26■□□□□ 0.19
UBCP0CG48 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.26■□□□□ 0.19
UBCP0CG48 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBCP0CG48 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 RCC2P3-201ENST00000418112 1537 ntBASIC16.25■□□□□ 0.19
UBCP0CG48 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.25■□□□□ 0.19
UBCP0CG48 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.25■□□□□ 0.19
UBCP0CG48 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
UBCP0CG48 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.25■□□□□ 0.19
UBCP0CG48 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.25■□□□□ 0.19
UBCP0CG48 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.25■□□□□ 0.19
UBCP0CG48 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.25■□□□□ 0.19
UBCP0CG48 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UBCP0CG48 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBCP0CG48 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.24■□□□□ 0.19
UBCP0CG48 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
UBCP0CG48 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.24■□□□□ 0.19
UBCP0CG48 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 ID1-201ENST00000376105 1233 ntBASIC16.24■□□□□ 0.19
UBCP0CG48 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.24■□□□□ 0.19
UBCP0CG48 KRT18P6-201ENST00000555540 1265 ntBASIC16.24■□□□□ 0.19
UBCP0CG48 CKBP1-201ENST00000565489 1086 ntBASIC16.24■□□□□ 0.19
UBCP0CG48 AC011298.2-201ENST00000617989 482 ntBASIC16.24■□□□□ 0.19
UBCP0CG48 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.24■□□□□ 0.19
UBCP0CG48 AL031985.4-201ENST00000642138 673 ntBASIC16.24■□□□□ 0.19
UBCP0CG48 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
UBCP0CG48 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
UBCP0CG48 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBCP0CG48 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.23■□□□□ 0.19
UBCP0CG48 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.23■□□□□ 0.19
UBCP0CG48 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.23■□□□□ 0.19
UBCP0CG48 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.23■□□□□ 0.19
UBCP0CG48 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.23■□□□□ 0.19
UBCP0CG48 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.23■□□□□ 0.19
UBCP0CG48 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
UBCP0CG48 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms